scinamic

Data Processing & Analysis

The Scinamic Client can be used as a standalone application for assay data analysis. Templates configure how data is read, normalized, transformed, masked, and fitted.

The template can be configured for arbitrary protocols and example templates exist for various types of micro-titer plate based dose response assays, time courses, temperature cycle assays, in vivo PK and efficacy studies and many more.

Features:

  • Flexible user configurable templates.
  • Template is specified through a node tree that may contain data, computational and visualization nodes. The layout of the visualization nodes is fully customizable by pages and view folders.
  • Many different node types are available for common data processing tasks, statistics, clustering, model fitting, plots, table views, editors, input/output etc.
  • Many example templates available that can be easily customized.
  • User can define functions and code plugins for less common custom processing pipelines.
  • Highly performant, built for large data sets.
  • Can be used either as a standalone data anlysis application or as part of the server based ELN, or both interchangeably.

ELN

The Electronic Labnotebook System uses the Data Processing & Analysis module in combination with the Scinamic Data management suite. It functions as a fully integrated ELN, registration, and result review & publication system.

Features:

  • Highly customizable, seamlessly integrates with data analysis platform.
  • Customizable Signature / Review Workflows.
  • 21 CFR Part 11 compliant.
  • Easy publication of endpoints into result data warehouse
  • Easy integration with LIMS registration workflows.
  • Email reminders / Commenting.
  • Easy integration with CROs.

LIMS

The Laboratory Inventory System module tracks biological and chemical entities as well as meta data entities like assays types or projects. It provides submodules for compound management, requesting, plate handling and tracking, and more.

At the same time it functions as the data warehouse that contains published result data and establishes the relational references between each assay endpoint and any registered records that were used in generating it.

Features:

  • Flexible Data Model. User customizable entities and data fields.
  • Custom handling of different types of chemicals, and various biologics such as proteins, antibodies, plasmids, cell-lines, genes.
  • Powerful custom search, without need for SQL.
  • Easy batch registration import & data export.
  • Custom modules for compound management & compound request.
  • Full audit trails.

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